Seamless integration for clinical workflows

IT integration

Abomics delivers secure and standards-based integration into healthcare IT solutions such as EHR and LIS. Our solutions bring pharmacogenetic recommendations, drug–lab effect insights and patient-specific pharmacogenetic (PGx) reports directly into clinical workflows. Integrations support high‑volume environments in hospitals and labs and can be tailored for regional data‑residency needs.

How integration works

API-first

RESTful API for fast, flexible integration of PGx reports, gene–drug data, and clinical decision support content.
API documentation

Standards‑based data exchange

Exchange data securely via HL7 and sFTP. Ideal for laboratories or systems with staged workflows.

Web & mobile access

Use Abomics’ clinician and patient portals (PWA) when full integration isn’t required.

Offline / on‑prem options

For strict data isolation environments, we offer a local model with token-based licensing.

Solutions for integration

PGx interpretation service

Transforms genetic data into practical support for medication selection.
Learn more

GeneRx pharmacogenetics database

Provides evidence‑based gene–drug recommendations to support clinical decision‑making.
Learn more

DLE drug–laboratory effects database

Helps interpret laboratory results by identifying the effects of medications.
Learn more

Why integration matters

Integrating Abomics solutions into existing health IT systems transforms advanced pharmacogenetics into everyday care. When PGx data and drug–lab effect insights are available directly within clinical systems, clinicians can access critical information exactly when they need it without manual lookups or workflow disruptions.
Use PGx results for a lifetime
Direct access to test results enables reuse for future prescriptions and care episodes maximizing value and improving outcomes.
Reduce manual steps
Embedded guidance minimizes switching between tools or manual lookups, saving time and supporting broader adoption.
Support automation and scalability
Structured formats (JSON, HL7) allow report delivery, alerts, and data storage with minimal admin effort.

Data flow in integrated system

IT integration specifications

Abomics solutions are designed to fit seamlessly into leading health IT systems.
We offer tools and support for reliable, scalable, and standards-compliant deployment in any healthcare environment.

Data formats and delivery options

  • JSON for structured, machine-readable data
  • PDF for clinician-friendly reports and archiving
  • HL7 and sFTP for secure message transport
  • Multilingual content and branding for localization

Implementation essentials

  • API documentation and onboarding for technical teams.
  • ATC and drug code mapping, plus localization options.
  • Stable endpoints, version control and audit logs for troubleshooting and traceability.

Security & compliance

  • Data privacy: PHI and PID processed separately, with full encryption in transit and at rest.
  • Certified storage: Secure servers, OWASP-guided vulnerability testing, daily backups.
  • Quality management: ISO 13485:2016 certified processes and documentation.
  • Regulatory alignment: GDPR complient, with documented privacy practices and support for IVDR 2017/746.
  • EHDS compatible: Designed for European Health Data Space interoperability.

Ready to integrate?

Let’s plan your connection.
Contact our team to review scope, endpoints and a sandbox access.
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Sami Miettinen

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  • sami.miettinen@abomicspgx.com
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